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Archive for the ‘publications’ Category

A new paper involving Environment Institute members Kate Sanders and Michael Lee (also SA Museum) as well as Arne Rasmussen (The Royal Danish Academy of Fine Arts), Mumpuni (Museum Zoologi Bogor), Johan Elmberg (Kristianstad University), Anstem de Silva (Gampola, Sri Lanka) and Michael Guinea (Charles Darwin University) has recently been published in the journal Molecular Ecology.

The paper titled ‘Recent rapid speciation and ecomorph divergence in Indo-Australian sea snakes’ investigated recent speciation and eco-morphological differentiation in four nominal sea snake species with overlapping ranges in Southeast Asia and Australia to shed light on the mechanisms underlying sea snake diversification.

According to the researchers, the results highlight the viviparous sea snakes as a promising system for speciation studies in the marine environment.

Read the paper to find out more.

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A new paper involving Environment Institute members Michael Lee (also SA Museum) and Adam Skinner (also SA Museum) as well as Agustin Camacho (University of Sao Paulo) has recently been published in the Journal of Biogeography.

The paper titled ‘The relationship between limb reduction, body elongation and geographical range in lizards’ looked at the relationship between changes in body form and geographical range size across 68 species of Lerista (a species-rich group of Australian scincid lizards).

mikeleeThe authors identify that the results suggest a general predictive relationship between body form and geographical range size in lizards: elongate, limb-reduced lizards tend to exhibit more restricted geographical ranges that may reflect reduced dispersal ability and may also predispose them to greater vulnerability of extinction.

Read the paper to find out more.

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A new paper involving Environment Institute members Jeremy Austin (also Museum Victoria), Julien Soubrier and Alan Cooper as well as Francisco Prevosti (Museo Argentino de Ciencias Naturales ‘Bernardino Rivadavia’—CONICET), Luciano Prates (Museo de La Plata), Valentina Trejo (Las Condes) and Francisco Mena (Centro de Investigación en Ecosistemas de la Patagonia) has been published in the journal Nature Communications.

The paper titled ‘The origins of the enigmatic Falkland Islands wolf’ explains how the researchers used carefully extracted DNA from museum specimens of the Falkland Islands wolf (Warrah) and subfossil bones of an extinct South American wolf to discover that the ancestor of the warrah probably walked to the islands across a frozen, narrow marine strait during the last ice age, about 16,000 years ago.

Using DNA from these two extinct species the researchers were able to show they were very closely related. Determining how close was the key to identifying when the ancestor of the warrah reached the Falkland Islands.

Read the paper to find out more about this historical discovery.

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A new paper involving Environment Institute member Barry Brook as well as Yasmeen Telwala (University of Dehli), Kumar Manish (University of Dehli) and Maharaj K Pandit (University of Dehli & National University of Singapore) has recently been published in the journal PLoS One.

The paper titled ‘Climate-Induced Elevational Range Shifts and Increase in Plant Species Richness in a Himalayan Biodiversity Epicentre’ uses historical and recent data on temperature and local species’ elevational ranges to perform a correlative study in the two alpine valleys of Sikkim Himalaya.

Flora of major mountain ranges are highly sensitive to climate change and mountains serve as suitable observation sites for tracing climate-induced biological response. The Himalaya constitute an important global biodiversity hotspot, yet studies on species’ response to climate change from this region are lacking.

The study shows that the ongoing warming in the alpine Sikkim Himalaya has transformed the plant assemblages and lends support to the hypothesis that changing climate is causing species distribution changes.

Read the paper to find out more.

 

 

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A new paper involving Environment Institute member John Tibby as well as L. Petherick (Queensland University of Technology & The University of Queensland), H. Bostock (National Institute of Water and Atmosphere), T.J. Cohen (The University of Wollongong), K. Fitzsimmons (Max Planck Institute for Evolutionary Anthropology), M.-S. Fletcher (Australian National University & University of Chile), P.Moss (University of Queensland), J. Reeves (University of Ballarat), S. Mooney (University of New South Wales), T. Barrows (University of Exeter), J. Kemp (Northumbria University), J. Jansen (Stockholm University), G. Nanson (University of Wollongong) and A. Dosseto (University of Wollongong) has recently been published in the the journal Quaternary Science Reviews.

John Tibby, one of the researchers involved on the paper

John Tibby, one of the researchers involved on the paper

The paper titled ”Climatic records over the past 30 ka from temperate Australia – a synthesis from the Oz-INTIMATE workgroup’ investigates broad-scale trends in climatic and environmental change in Australia over the past 30 ka.

Temperate Australia sits between the heat engine of the tropics and the cold Southern Ocean, encompassing a range of rainfall regimes and falling under the influence of different climatic drivers, despite this, researchers were able  to synthesise available palaeoenvironmental records and show that it is possible to gain insight into broader scale climatic and environmental variability without losing the intricacies of individual records.

Read the paper to find out more.

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A new paper involving Environment Institute members Clio Der Sarkissian, Alan Cooper and Wolfgang Haak as well as Oleg Balanovsky(Russian Academy of Medical Sciences & Russian Academy of Sciences), Valery Zaporozhchenko (Russian Academy of Medical Sciences), Elena Balanovska (Russian Academy of Medical Sciences),Guido Brandt (Johannes Gutenberg University of Mainz), Kurt W. Alt (Johannes Gutenberg University of Mainz),Valery Khartanovich(Kunstkamera Museum), Vyacheslav Moiseyev (Kunstkamera Museum),Alexandra Buzhilova (Russian Academy of Sciences), Sergey Koshel (Moscow State University),Römisch-Germanisches (Zentralmuseum), Eugen Kolpakov(Russian Academy of Science), Vladimir Shumkin(Russian Academy of Science) has recently been published in the journal PLoS Genetics.

The paper titled Ancient DNA Reveals Prehistoric Gene-Flow from Siberia in the Complex Human Population History of North East Europeanalysed the mitochondrial DNA of prehistoric remains from archaeological sites in North East Europe dated to 7,500 and 3,500 years Before Present.

Wolfgang Haak, one of the contributing authors on the paper

Wolfgang Haak, one of the contributing authors on the paper

This region in Europe displays a significant cultural and linguistic diversity today, however no ancient human DNA was available before. The resutls show that prehistoric hunter-gatherers of North East Europe were genetically similar to other European foragers. The authors also detected a prehistoric genetic input from Siberia, followed by migrations from Western Europe into North East Europe.

This research contributes to the understanding of the origins and past dynamics of human population in Europe.

Download the paper to find out more.

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A new paper involving Environment Institute members Ana Sequeira, Camille Mellin (also Australian Institute of Marine Science) and Corey Bradshaw (also SARDI) as well as Mark Meekan (Australian Institute of Marine Science) and David Sims (Marine Biological Association of the United Kingdom) has recently been published in the Journal of Fish Biology.

The paper titled ‘Inferred global connectivity of whale shark Rhincodon typus populations’ collates available data on sightings, tracked movements and distribution information of whale sharks (Rhincodon Typus).

Currently, information on population geographic connectivity, migration and demography of whale sharks is still limited and scattered. However, understanding whale sharks migratory behaviour is central to its conservation management. The study provides evidence for the hypothesis of broad-scale connectivity among populations, and generates a model describing how the world’s whale sharks are part of a single, global meta-population.

Image: Whale Shark, coutesy of KAZ2.0/Flickr

Image: Whale Shark, coutesy of KAZ2.0/Flickr

The model provides a worldwide perspective of possible whale shark migration routes, and suggests a modified focus for additional research to test its predictions. The authors suggest that the framework can be used to trim the hypotheses for whale shark movements and aggregation timings, thereby isolating possible mating and breeding areas that are currently unknown. They believe this will assist efforts to predict the longer-term response of the species to ocean warming and changing patterns of human-induced mortality.

Download the paper to find out more.

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A new paper involving Environment Institute members Sanghyun Hong (also IMER), Corey Bradshaw (also SARDI) and Barry Brook has recently been published in the journal Energy Policy.

The paper ‘Evaluating options for the future energy mix of Japan after the Fukushima nuclear crisis’ reviews and quantifies a range of tangible negative environmental, economic and social impacts of the four proposed energy mixes in Japan. Using data describing levelised cost of electricity, energy security, greenhouse-gas emissions, land transformation, water consumption, heated-water discharge, air pollution, radioactive waste, solid waste, and safety issues, the authors conclude that:

  • the nuclear-free scenario has more negative impacts than the current condition,
  • to meet the greenhouse-gas-emission guidelines, more than 35% nuclear power supply is essential,
  • to minimise accident risk, or possible fatalities from electricity generation, fossil fuels should be avoided rather than nuclear power,
  • despite restoration and compensation costs, a higher penetration of nuclear power will lead to cheaper levelised costs of energy, and
  • the less that nuclear power is used, the lower will be the sustainability of the future Japanese energy system.

After the Fukushima nuclear accident social and political reluctance to embrace nuclear power in Japan (and elsewhere) has increased. The Japanese government has thus been considering four possible future energy mixes, including a nuclear-free pathway, and three others with 10%–35% nuclear supply coupled with a larger proportion of renewable energy and fossil fuels to replace nuclear.

The study finds that the nuclear-free pathway has the highest overall potential for adverse outcomes, and the 35% nuclear power supply option yielding the lowest negative impact score without weightings. Despite some sensitivity to the choice of criterion weights, the author’s analysis demonstrates clearly that from a practical perspective, a nuclear-free pathway for Japan is the worst option to pursue.

The authors note concerns not addressed in the paper include fears of nuclear weapon proliferation, waste disposal and background radiation, but view these as questionable, especially for later-generation nuclear power technology (Brook, 2012). They note the biggest challenges to implementing a sustainable energy future in Japan are restoring the public acceptance of and confidence in nuclear power, further improving safety mechanisms and management culture, and providing better public education on the difficult but unavoidable trade-offs involved in energy policy.

The researchers recommend the evaluation methodology they have used for Japan as it can be applied to other countries to evaluate future electricity generation scenarios.

Download the paper to find out more.

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A new paper involving Environment Institute members Thomas Prowse, Corey Bradshaw (also SARDI), Michael Watts and Barry Brook as well as Christopher Johnson (University of Tasmania), Robert Lacy (Chicago Zoological Society) and John Pollak (Cornell University) has recently been published in the Journal of Animal Ecology.

The paper titled ‘No need for disease: testing extinction hypotheses for the thylacine using multi-species metamodels’ designed a new population viability approach (PVA) that includes species interactions explicitly by networking species models within a single ‘metamodel’.

Thylacine Thylacinus cynocephalusImage: Kelly Garbato

Thylacine Thylacinus cynocephalus
Image: Kelly Garbato (Flikr)

Population viability analysis (PVA) is used to assess the extinction risk of threatened species and to evaluate different management strategies. However, conventional PVA neglects important biotic interactions and therefore can fail to identify important threatening processes.

This study demonstrates the utility of PVA metamodels by using them to reinterpret the extinction of the carnivorous, marsupial thylacine Thylacinus cynocephalus (Tasmanian Tiger) in Tasmania. In particular, they test the claim that well-documented impacts of European settlement cannot account for this extinction and that an unknown disease must have been an additional and necessary cause.

Read the paper to find out more.

 

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A new paper involving Environment Institute members Kim Loeun (also ADECAL), Camille Mellin (also Australian Institute of Marine Science) and Corey Bradshaw (also SARDI), as well as A.J Williams (Oceanic Fisheries Programme), S.J Nicol (Oceanic Fisheries Programme), P. Chavance (ADECAL), M. Ducrocq (ADECAL), S.J Harley (Oceanic Fisheries Programme), G.M Pilling (Oceanic Fisheries Programme) and V. Allain (Oceanic Fisheries Programme) has recently been published in the Journal of Applied Ichthyology.

The paper titled ‘Population biology and vulnerability to fishing of deep-water Eteline snappers’ looks into the concern from fisheries about the sustainability of current fishing rates of deep-water fish in the tropical and sub-tropical Pacific Ocean.

Currently, significant assessments of deep-water stocks in the Pacific region have been limited by the lack of suitable biological and fisheries data. However, estimates are provided of age-based demographic parameters for two important deep-water snapper species in the Pacific, Etelis carbunculus and E. coruscans. The study applied a spawner biomass-per-recruit (SPR) model to determine fishing mortality rates for each species that would achieve specified biological targets and limit reference points, and examine the sensitivity of the model to variation in natural mortality and age at first capture. The SPR analysis demonstrated that lower rates of fishing mortality were required for the E. coruscans species than for the E. carbunculus species to maintain spawning biomass above estimated biological reference points. The results showed that estimates of SPR were more sensitive to variation in natural mortality than in the age at first capture, suggesting that regulating fishing mortality rather than gear selectivity would be a more effective management measure for both species.

Read the paper to find out more about this research.

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